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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
WGBS
11
RRBS
1
DNAme array
Assay category
403
Transcription
398
DNA accessibility
343
DNA binding
63
DNA methylation
28
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
15
July, 2019
August, 2017
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
26
bed bedMethyl
26
bigBed bedMethyl
16
bam
bigWig
13
fastq
6
tsv
Organism
63
Homo sapiens
Biosample type
54
primary cell
9
tissue
Organ
53
epithelium
49
pancreas
4
heart
kidney
2
brain
2
liver
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
musculature of body
1
pericardium
Project
47
HPAP
16
AMP
Genome assembly (visualization)
11
hg19
Lab
47
Klaus Kaestner, Upenn
16
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigWig
month_released!
August, 2017
organ_slims!
kidney
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
63 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 4 more…
tissue
heart left ventricle
2
1
aorta
1
brain
1
islet of Langerhans
1
pancreas
1
+ See 2 more…
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