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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
WGBS
21
RRBS
1
DNAme array
Assay category
410
DNA binding
400
DNA accessibility
348
Transcription
76
DNA methylation
26
3D chromatin structure
Date released
41
May, 2022
19
July, 2019
9
August, 2017
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
34
bed bedMethyl
34
bigBed bedMethyl
18
fastq
16
bam
bigWig
6
tsv
Organism
76
Homo sapiens
Biosample type
58
primary cell
18
tissue
Organ
53
epithelium
49
pancreas
6
liver
5
connective tissue
5
musculature of body
adipose tissue
4
heart
4
kidney
2
brain
2
vasculature
1
blood vessel
1
eye
1
pericardium
Project
47
HPAP
29
AMP
Genome assembly (visualization)
19
hg19
Lab
47
Klaus Kaestner, Upenn
29
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bigWig
month_released!
August, 2021
organ_slims!
adipose tissue
gonad
BIOSAMPLE
ASSAY
76 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 8 more…
tissue
liver
3
1
skeletal muscle tissue
4
heart left ventricle
2
1
aorta
1
brain
1
+ See 5 more…
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