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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 58WGBS
  • 21RRBS
  • 1DNAme array
Assay category
  • 516Transcription
  • 482DNA accessibility
  • 481DNA binding
  • 80DNA methylation
  • 293D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 19July, 2019
  • 13August, 2017
  • 6February, 2021
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 36bed bedMethyl
  • 36bigBed bedMethyl
  • 21fastq
  • 18bam
  • bigWig
  • 6tsv
Organism
  • 80Homo sapiens
Biosample type
  • 58primary cell
  • 22tissue
Organ
  • 53epithelium
  • 49pancreas
  • 6liver
  • 5connective tissue
  • 5musculature of body
  • 4adipose tissue
  • 4heart
  • 4kidney
  • 2brain
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1pericardium
Project
  • 47HPAP
  • 33AMP
Genome assembly (visualization)
  • 19hg19
Lab
  • 47Klaus Kaestner, Upenn
  • 33AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.file_type!
  • bigWig
BIOSAMPLE
ASSAY

80 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
liver31
skeletal muscle tissue4
heart left ventricle21
subcutaneous abdominal adipose tissue3
adipose tissue1
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