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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
WGBS
16
RRBS
1
DNAme array
Assay category
1068
Transcription
951
DNA binding
700
DNA accessibility
72
DNA methylation
9
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
26
July, 2019
4
August, 2017
1
May, 2021
Available data
41
zippedFastqFolder
33
bed bedMethyl
33
bigBed bedMethyl
fastq
16
bam
15
bigWig
6
tsv
Organism
72
Homo sapiens
Biosample type
50
primary cell
22
tissue
Organ
47
epithelium
43
pancreas
10
heart
connective tissue
4
kidney
4
liver
4
musculature of body
3
adipose tissue
3
vasculature
2
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
41
HPAP
31
AMP
Genome assembly (visualization)
14
hg19
8
GRCh38
Lab
41
Klaus Kaestner, Upenn
31
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
fastq
hic
organ_slims!
connective tissue
spinal cord
BIOSAMPLE
ASSAY
72 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
tissue
heart left ventricle
4
1
aorta
2
heart right ventricle
2
liver
2
skeletal muscle tissue
2
+ See 9 more…
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