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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
WGBS
16
RRBS
1
DNAme array
Assay category
1470
Transcription
894
DNA binding
671
DNA accessibility
73
DNA methylation
25
3D chromatin structure
Date released
41
May, 2022
24
July, 2019
7
August, 2017
1
May, 2021
Available data
41
zippedFastqFolder
34
bed bedMethyl
34
bigBed bedMethyl
fastq
16
bam
16
bigWig
6
tsv
Organism
73
Homo sapiens
Biosample type
50
primary cell
23
tissue
Organ
47
epithelium
43
pancreas
10
heart
4
connective tissue
4
kidney
4
liver
4
musculature of body
3
adipose tissue
vasculature
2
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
41
HPAP
32
AMP
Genome assembly (visualization)
14
hg19
7
GRCh38
Lab
41
Klaus Kaestner, Upenn
32
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
fastq
lab.title!
Bing Ren, UCSD
month_released!
October, 2017
organ_slims!
vasculature
BIOSAMPLE
ASSAY
73 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
tissue
heart left ventricle
4
1
subcutaneous abdominal adipose tissue
3
heart right ventricle
2
liver
2
skeletal muscle tissue
2
+ See 9 more…
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