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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 58WGBS
  • 17RRBS
  • 1DNAme array
Assay category
  • 1547Transcription
  • 1014DNA binding
  • 730DNA accessibility
  • 76DNA methylation
  • 333D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 27July, 2019
  • 7August, 2017
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 36bed bedMethyl
  • 36bigBed bedMethyl
  • fastq
  • 18bam
  • 17bigWig
  • 6tsv
Organism
  • 76Homo sapiens
Biosample type
  • 51primary cell
  • 25tissue
Organ
  • 47epithelium
  • 43pancreas
  • 10heart
  • 4connective tissue
  • 4kidney
  • 4liver
  • 4musculature of body
  • 3adipose tissue
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 41HPAP
  • 35AMP
Genome assembly (visualization)
  • 15hg19
  • 8GRCh38
Lab
  • 41Klaus Kaestner, Upenn
  • 35AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.file_type!
  • fastq
BIOSAMPLE
ASSAY

76 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell25
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
heart left ventricle41
subcutaneous abdominal adipose tissue3
aorta2
heart right ventricle2
liver2
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