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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 69WGBS
  • 21RRBS
  • 1DNAme array
Assay category
  • 1881Transcription
  • 1735DNA binding
  • 828DNA accessibility
  • 91DNA methylation
  • 343D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 27July, 2019
  • 11August, 2017
  • 6February, 2021
  • 5November, 2018
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 32bed bedMethyl
  • 32bigBed bedMethyl
  • 15fastq
  • 14bam
  • 13bigWig
  • 6tsv
Organism
  • 91Homo sapiens
Biosample type
  • 58primary cell
  • 32tissue
  • 1cell line
Organ
  • 53epithelium
  • 51pancreas
  • 10heart
  • 6liver
  • 6musculature of body
  • 4connective tissue
  • 4kidney
  • 3adipose tissue
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 47HPAP
  • 44AMP
Genome assembly (visualization)
  • 19hg19
  • 13GRCh38
Lab
  • 47Klaus Kaestner, Upenn
  • 44AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.platform.term_name!
  • Illumina HiSeq 2500
BIOSAMPLE
ASSAY

91 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
heart left ventricle41
skeletal muscle tissue4
liver21
subcutaneous abdominal adipose tissue3
aorta2
cell line
HepG21
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