Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 74WGBS
  • 21RRBS
  • 1DNAme array
Assay category
  • 1861DNA binding
  • 1719Transcription
  • 832DNA accessibility
  • 96DNA methylation
  • 343D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 27July, 2019
  • 15August, 2017
  • 6February, 2021
  • 6November, 2018
  • 1May, 2021
Available data
  • 35bed bedMethyl
  • 35bigBed bedMethyl
  • 17bam
  • 16bigWig
  • 14fastq
  • 6tsv
Organism
  • 96Homo sapiens
Biosample type
  • 58primary cell
  • 37tissue
  • 1cell line
Organ
  • 52pancreas
  • 10heart
  • 7connective tissue
  • 7liver
  • 6adipose tissue
  • 6epithelium
  • 6musculature of body
  • 4kidney
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 49AMP
  • 47HPAP
Genome assembly (visualization)
  • 19hg19
  • 16GRCh38
Lab
  • 49AMP-T2D consortium
  • 47Klaus Kaestner, Upenn
Audit category:
  • 2inconsistent ontology term
files.read_length!
  • 101
BIOSAMPLE
ASSAY

96 results

search-icontable-tab-icon
Clear Filters
WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
heart left ventricle41
liver31
skeletal muscle tissue4
adipose tissue3
subcutaneous abdominal adipose tissue3
cell line
HepG21
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego