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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
WGBS
17
RRBS
1
DNAme array
Assay category
1709
Transcription
1175
DNA binding
826
DNA accessibility
87
DNA methylation
34
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
27
July, 2019
7
August, 2017
6
February, 2021
5
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
28
bed bedMethyl
28
bigBed bedMethyl
14
bam
13
bigWig
11
fastq
6
tsv
Organism
87
Homo sapiens
Biosample type
57
primary cell
29
tissue
1
cell line
Organ
53
epithelium
51
pancreas
10
heart
5
liver
4
connective tissue
4
kidney
4
musculature of body
3
adipose tissue
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
40
AMP
Genome assembly (visualization)
15
hg19
13
GRCh38
Lab
47
Klaus Kaestner, Upenn
40
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.run_type!
single-ended
BIOSAMPLE
ASSAY
87 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
4
1
subcutaneous abdominal adipose tissue
3
aorta
2
body of pancreas
2
heart right ventricle
2
+ See 12 more…
cell line
HepG2
1
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