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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 68WGBS
  • 21RRBS
  • 1DNAme array
Assay category
  • 1917Transcription
  • 1801DNA binding
  • 822DNA accessibility
  • 90DNA methylation
  • 343D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 27July, 2019
  • 15August, 2017
  • November, 2018
  • 6February, 2021
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 29bed bedMethyl
  • 29bigBed bedMethyl
  • 14fastq
  • 11bam
  • 10bigWig
  • 6tsv
Organism
  • 90Homo sapiens
Biosample type
  • 58primary cell
  • 32tissue
Organ
  • 53epithelium
  • 49pancreas
  • 10heart
  • 7connective tissue
  • 6adipose tissue
  • 6liver
  • 6musculature of body
  • 4kidney
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 47HPAP
  • 43AMP
Genome assembly (visualization)
  • 19hg19
  • 10GRCh38
Lab
  • 47Klaus Kaestner, Upenn
  • 43AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
month_released!
  • November, 2018
BIOSAMPLE
ASSAY

90 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
heart left ventricle41
liver31
skeletal muscle tissue4
adipose tissue3
subcutaneous abdominal adipose tissue3
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