Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 69WGBS
  • 21RRBS
  • 1DNAme array
Assay category
  • 1798DNA binding
  • 1517Transcription
  • 825DNA accessibility
  • 91DNA methylation
  • 343D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 27July, 2019
  • 9August, 2017
  • 7November, 2018
  • 6February, 2021
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 34bed bedMethyl
  • 34bigBed bedMethyl
  • 18fastq
  • 16bam
  • 15bigWig
  • 6tsv
Organism
  • 91Homo sapiens
Biosample type
  • 58primary cell
  • 32tissue
  • 1cell line
Organ
  • 53epithelium
  • 53pancreas
  • 10heart
  • 7connective tissue
  • 7liver
  • adipose tissue
  • 6musculature of body
  • 4kidney
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 47HPAP
  • 44AMP
Genome assembly (visualization)
  • 19hg19
  • 15GRCh38
Lab
  • 47Klaus Kaestner, Upenn
  • 44AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • adipose tissue
BIOSAMPLE
ASSAY

91 results

search-icontable-tab-icon
Clear Filters
WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
heart left ventricle41
liver31
skeletal muscle tissue4
pancreas21
aorta2
cell line
HepG21
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego