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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 75WGBS
  • 19RRBS
  • 1DNAme array
Assay category
  • 1894Transcription
  • 1653DNA binding
  • 796DNA accessibility
  • 95DNA methylation
  • 313D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 25July, 2019
  • 15August, 2017
  • 7November, 2018
  • 6February, 2021
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 34bed bedMethyl
  • 34bigBed bedMethyl
  • 21fastq
  • 18bam
  • 17bigWig
  • 6tsv
Organism
  • 95Homo sapiens
Biosample type
  • 57primary cell
  • 37tissue
  • 1cell line
Organ
  • 53epithelium
  • 53pancreas
  • 10heart
  • 7connective tissue
  • 7liver
  • 6adipose tissue
  • 6musculature of body
  • 4kidney
  • 3vasculature
  • 2blood vessel
  • brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 48AMP
  • 47HPAP
Genome assembly (visualization)
  • 17GRCh38
  • 17hg19
Lab
  • 48AMP-T2D consortium
  • 47Klaus Kaestner, Upenn
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • brain
BIOSAMPLE
ASSAY

95 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
epithelial cell of proximal tubule1
tissue
heart left ventricle41
liver31
skeletal muscle tissue4
adipose tissue3
pancreas21
cell line
HepG21
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