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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 69WGBS
  • 20RRBS
  • 1DNAme array
Assay category
  • 1718DNA binding
  • 1437Transcription
  • 799DNA accessibility
  • 90DNA methylation
  • 333D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 26July, 2019
  • 9August, 2017
  • 7November, 2018
  • 6February, 2021
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 33bed bedMethyl
  • 33bigBed bedMethyl
  • 18fastq
  • 16bam
  • 15bigWig
  • 6tsv
Organism
  • 90Homo sapiens
Biosample type
  • 57primary cell
  • 32tissue
  • 1cell line
Organ
  • 53epithelium
  • 53pancreas
  • 10heart
  • connective tissue
  • 7liver
  • 6adipose tissue
  • 6musculature of body
  • 4kidney
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 47HPAP
  • 43AMP
Genome assembly (visualization)
  • 18hg19
  • 15GRCh38
Lab
  • 47Klaus Kaestner, Upenn
  • 43AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
organ_slims!
  • connective tissue
BIOSAMPLE
ASSAY

90 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
tissue
heart left ventricle41
liver31
skeletal muscle tissue4
pancreas21
aorta2
cell line
HepG21
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