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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 75WGBS
  • 15RRBS
  • 1DNAme array
Assay category
  • 1742DNA binding
  • 1717Transcription
  • 710DNA accessibility
  • 91DNA methylation
  • 263D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 21July, 2019
  • 15August, 2017
  • 7November, 2018
  • 6February, 2021
  • 1May, 2021
Available data
  • 30bed bedMethyl
  • 30bigBed bedMethyl
  • 18bam
  • 17bigWig
  • 15fastq
  • 6tsv
Organism
  • 91Homo sapiens
Biosample type
  • 52primary cell
  • 38tissue
  • 1cell line
Organ
  • 53pancreas
  • 10heart
  • 7connective tissue
  • 7liver
  • 6adipose tissue
  • epithelium
  • 6musculature of body
  • 4kidney
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 47HPAP
  • 44AMP
Genome assembly (visualization)
  • 17GRCh38
  • 13hg19
Lab
  • 47Klaus Kaestner, Upenn
  • 44AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
organ_slims!
  • epithelium
BIOSAMPLE
ASSAY

91 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
monocyte1
tissue
heart left ventricle41
liver31
skeletal muscle tissue4
adipose tissue3
pancreas21
cell line
HepG21
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