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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 67WGBS
  • 19RRBS
  • 1DNAme array
Assay category
  • 1752Transcription
  • 1737DNA binding
  • 756DNA accessibility
  • 87DNA methylation
  • 313D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 17July, 2019
  • 15August, 2017
  • 7November, 2018
  • 6February, 2021
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 28bed bedMethyl
  • 28bigBed bedMethyl
  • 21fastq
  • 12bam
  • 11bigWig
  • 6tsv
Organism
  • 87Homo sapiens
Biosample type
  • 57primary cell
  • 29tissue
  • 1cell line
Organ
  • 53epithelium
  • 53pancreas
  • heart
  • 7connective tissue
  • 7liver
  • 6adipose tissue
  • 6musculature of body
  • 4kidney
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 47HPAP
  • 40AMP
Genome assembly (visualization)
  • 17hg19
  • 11GRCh38
Lab
  • 47Klaus Kaestner, Upenn
  • 40AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
organ_slims!
  • heart
BIOSAMPLE
ASSAY

87 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
tissue
liver31
skeletal muscle tissue4
adipose tissue3
pancreas21
subcutaneous abdominal adipose tissue3
cell line
HepG21
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