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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 75WGBS
  • 17RRBS
  • 1DNAme array
Assay category
  • 1819DNA binding
  • 1793Transcription
  • 670DNA accessibility
  • 93DNA methylation
  • 333D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 23July, 2019
  • 15August, 2017
  • 7November, 2018
  • 6February, 2021
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 32bed bedMethyl
  • 32bigBed bedMethyl
  • 21fastq
  • 18bam
  • 17bigWig
  • 6tsv
Organism
  • 93Homo sapiens
Biosample type
  • 55primary cell
  • 37tissue
  • 1cell line
Organ
  • 53epithelium
  • 53pancreas
  • 10heart
  • 7connective tissue
  • 7liver
  • 6adipose tissue
  • 6musculature of body
  • kidney
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 47HPAP
  • 46AMP
Genome assembly (visualization)
  • 17GRCh38
  • 15hg19
Lab
  • 47Klaus Kaestner, Upenn
  • 46AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
organ_slims!
  • kidney
BIOSAMPLE
ASSAY

93 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
heart left ventricle41
liver31
skeletal muscle tissue4
adipose tissue3
pancreas21
cell line
HepG21
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