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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 70WGBS
  • 19RRBS
  • 1DNAme array
Assay category
  • 1725Transcription
  • 1319DNA binding
  • 804DNA accessibility
  • 90DNA methylation
  • 303D chromatin structure
Date released
  • 41May, 2022
  • 25July, 2019
  • 11August, 2017
  • 6February, 2021
  • 6November, 2018
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 33bed bedMethyl
  • 33bigBed bedMethyl
  • 18fastq
  • 17bam
  • 16bigWig
  • 6tsv
Organism
  • 90Homo sapiens
Biosample type
  • 57primary cell
  • 33tissue
Organ
  • 53epithelium
  • 53pancreas
  • 10heart
  • 7connective tissue
  • liver
  • 6adipose tissue
  • 6musculature of body
  • 4kidney
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 47HPAP
  • 43AMP
Genome assembly (visualization)
  • 17hg19
  • 16GRCh38
Lab
  • 47Klaus Kaestner, Upenn
  • 43AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • liver
BIOSAMPLE
ASSAY

90 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
heart left ventricle41
skeletal muscle tissue4
adipose tissue3
pancreas21
subcutaneous abdominal adipose tissue3
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