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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 74WGBS
  • 16RRBS
  • 1DNAme array
Assay category
  • 1909Transcription
  • 1832DNA binding
  • 797DNA accessibility
  • 91DNA methylation
  • 283D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 25July, 2019
  • 11August, 2017
  • 7November, 2018
  • 6February, 2021
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 32bed bedMethyl
  • 32bigBed bedMethyl
  • 19fastq
  • 17bam
  • 16bigWig
  • 6tsv
Organism
  • 91Homo sapiens
Biosample type
  • 57primary cell
  • 33tissue
  • 1cell line
Organ
  • 53epithelium
  • 53pancreas
  • 10heart
  • 7connective tissue
  • 7liver
  • 6adipose tissue
  • musculature of body
  • 4kidney
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 47HPAP
  • 44AMP
Genome assembly (visualization)
  • 16GRCh38
  • 16hg19
Lab
  • 47Klaus Kaestner, Upenn
  • 44AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • musculature of body
BIOSAMPLE
ASSAY

91 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
heart left ventricle41
liver31
adipose tissue3
pancreas21
subcutaneous abdominal adipose tissue3
cell line
HepG21
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