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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19RRBS
  • 8WGBS
Assay category
  • 574DNA binding
  • 120DNA accessibility
  • 57Transcription
  • 27DNA methylation
  • 103D chromatin structure
Date released
  • 16July, 2019
  • 6February, 2021
  • 4August, 2017
  • 1November, 2018
Available data
  • 20bed bedMethyl
  • 20bigBed bedMethyl
  • 11fastq
  • 6tsv
  • 1bam
  • 1bigWig
Organism
  • 27Homo sapiens
Biosample type
  • 16primary cell
  • 10tissue
  • 1cell line
Organ
  • 12epithelium
  • 8pancreas
  • 4kidney
  • 4liver
  • 3musculature of body
  • 2brain
  • 2heart
  • 1connective tissue
  • 1eye
  • 1pericardium
  • 1vasculature
Project
  • 21AMP
  • 6HPAP
Genome assembly (visualization)
  • 19hg19
  • 1GRCh38
Lab
  • 21AMP-T2D consortium
  • 6Klaus Kaestner, Upenn
Audit category:
  • 2inconsistent ontology term
BIOSAMPLE
ASSAY

27 results

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Clear Filters
RRBS
WGBS
primary cell
pancreatic alpha cell6
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
tissue
skeletal muscle tissue2
brain1
heart left ventricle1
islet of Langerhans1
kidney1
cell line
HepG21
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