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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
total RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
483
DNA binding
111
Transcription
DNA accessibility
4
3D chromatin structure
1
DNA methylation
1
DNA sequencing
Date released
78
February, 2021
17
August, 2021
5
January, 2019
March, 2020
4
May, 2021
4
October, 2019
2
March, 2023
1
November, 2019
Available data
109
tsv
100
bam
100
bigWig
5
fastq
Organism
109
Homo sapiens
Biosample type
1209
tissue
436
primary cell
136
in vitro differentiated cells
111
cell line
2
stem cell
Organ
52
artery
52
blood vessel
52
heart
52
vasculature
32
epithelium
31
pancreas
14
liver
8
embryo
4
kidney
Project
109
AMP
2
community
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
100
AMP-T2D consortium
9
Bing Ren, UCSD
2
Anna Gloyn, Oxford
Audit category:
34
inconsistent ontology term
assay_slims!
DNA accessibility
award.project!
LungMap
month_released!
March, 2020
BIOSAMPLE
ASSAY
111 results
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total RNA-seq
shRNA RNA-seq
siRNA RNA-seq
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
31
HepG2
14
H1-hESC
8
EndoC-BH1
1
1
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