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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
213
total RNA-seq
37
single cell RNA-seq
Assay category
250
Transcription
165
DNA binding
133
DNA accessibility
DNA methylation
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
184
bam
180
bigWig
180
tsv
33
zippedFastqFolder
6
fastq
6
txt
2
bed bed3+
Organism
250
Homo sapiens
Biosample type
93
primary cell
86
in vitro differentiated cells
67
tissue
4
cell line
Organ
47
pancreas
25
liver
11
epithelium
3
heart
2
embryo
1
connective tissue
1
kidney
1
musculature of body
Project
166
AMP
51
T1D
33
HPAP
Genome assembly (visualization)
180
hg19
178
GRCh38
Lab
132
AMP-T2D consortium
65
Kyle Gaulton, UCSD
33
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
Audit category:
71
inconsistent ontology term
2
audit script error
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
250 results
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Clear Filters
total RNA-seq
single cell RNA-seq
primary cell
monocyte
52
Langerhans cell
33
hepatocyte
5
CD8-positive, alpha-beta T cell
2
embryonic stem cell
1
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
embryonic stem cell
5
cardiomyocytes (cardiac muscle cell)
1
2
cardiac fibroblast
1
+ See 9 more…
tissue
islet of Langerhans
42
liver
20
cardiac atrium
1
cardiac ventricle
1
kidney
1
+ See 2 more…
cell line
EndoC_BH1
4
See all biosamples
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