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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1016
total RNA-seq
87
single cell RNA-seq
15
small RNA-seq
Assay category
1118
Transcription
784
DNA binding
404
DNA accessibility
13
3D chromatin structure
11
DNA methylation
Date released
450
February, 2021
143
May, 2020
120
July, 2018
89
August, 2017
64
August, 2021
47
September, 2023
40
July, 2019
37
May, 2021
27
May, 2022
22
February, 2020
20
October, 2019
19
November, 2019
13
February, 2023
9
April, 2020
7
March, 2020
6
April, 2018
4
May, 2023
1
December, 2019
Available data
942
tsv
910
bam
904
bigWig
103
fastq
72
txt
6
csv
Organism
1118
Homo sapiens
Biosample type
1118
tissue
432
primary cell
137
in vitro differentiated cells
63
cell line
2
stem cell
Organ
457
connective tissue
399
adipose tissue
291
pancreas
174
liver
115
kidney
heart
62
bone element
21
brain
19
eye
13
blood vessel
13
vasculature
9
lung
7
limb
7
musculature of body
5
nerve
4
artery
4
skeleton
2
epithelium
1
spinal cord
Project
1055
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
905
GRCh38
905
hg19
Lab
969
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
1
Bing Ren, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
assay_title!
pCHi-C
files.file_type!
bed bedMethyl
organ_slims!
heart
BIOSAMPLE
ASSAY
1118 results
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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
islet of Langerhans
292
6
liver
167
1
1
kidney
49
64
bone tissue
58
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