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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
206
total RNA-seq
7
small RNA-seq
4
single cell RNA-seq
Assay category
770
DNA binding
217
Transcription
66
DNA accessibility
9
DNA methylation
7
3D chromatin structure
1
DNA sequencing
Target of assay
3
control
Date released
143
May, 2020
20
May, 2022
18
July, 2019
13
February, 2020
9
August, 2021
5
December, 2019
5
January, 2019
2
October, 2019
1
February, 2021
1
March, 2020
Available data
196
tsv
174
bam
174
bigWig
5
fastq
1
csv
Organism
217
Homo sapiens
Biosample type
195
tissue
14
cell line
8
primary cell
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
217
AMP
Genome assembly (visualization)
174
GRCh38
174
hg19
Lab
188
AMP-T2D consortium
20
Karen Mohlke, UNC
9
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
217 results
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total RNA-seq
small RNA-seq
single cell RNA-seq
tissue
liver
167
1
1
right lobe of liver
3
2
frontal cortex
2
1
cerebellum
2
cerebellum (Hemisphere)
1
1
+ See 12 more…
cell line
HepG2
14
primary cell
hepatocyte
5
cerebellar granule cell
2
Purkinje cell
1
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