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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
102
single cell RNA-seq
15
small RNA-seq
Assay category
836
DNA binding
420
DNA accessibility
117
Transcription
26
3D chromatin structure
18
DNA methylation
Target of assay
3
control
Date released
47
April, 2018
46
July, 2018
18
July, 2019
3
August, 2018
3
June, 2018
Available data
117
bam
117
bigWig
117
tsv
95
fastq
Organism
117
Homo sapiens
Biosample type
97
primary cell
20
tissue
Organ
82
pancreas
70
epithelium
7
brain
connective tissue
3
adipose tissue
3
liver
2
musculature of body
1
heart
1
kidney
Project
117
AMP
Genome assembly (visualization)
117
GRCh38
117
hg19
Lab
117
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_title!
total RNA-seq
organ_slims!
connective tissue
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
117 results
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single cell RNA-seq
small RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 13 more…
tissue
islet of Langerhans
6
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
+ See 8 more…
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