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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
total RNA-seq
Assay category
139
DNA binding
126
DNA accessibility
79
Transcription
54
DNA methylation
9
3D chromatin structure
Date released
46
February, 2023
16
September, 2020
6
May, 2022
4
July, 2018
3
February, 2020
2
March, 2020
1
August, 2021
1
May, 2021
Available data
59
fastq
6
bam
6
txt
4
tsv
Organism
79
Homo sapiens
Biosample type
53
primary cell
22
tissue
4
in vitro differentiated cells
Organ
113
kidney
96
heart
73
pancreas
55
epithelium
31
liver
19
eye
12
brain
9
blood vessel
9
lung
9
vasculature
6
connective tissue
4
artery
4
bone element
4
skeleton
3
limb
3
musculature of body
2
adipose tissue
1
nerve
1
spinal cord
Project
53
HPAP
19
AMP
7
T1D
Genome assembly (visualization)
GRCh38
877
hg19
Lab
53
Klaus Kaestner, Upenn
13
AMP-T2D consortium
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
assembly!
GRCh38
organ_slims!
spleen
BIOSAMPLE
ASSAY
79 results
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total RNA-seq
primary cell
pancreatic alpha cell
42
pancreatic beta cell
11
tissue
islet of Langerhans
18
body of pancreas
1
omental fat pad
1
pancreas
1
subcutaneous adipose tissue
1
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
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