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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
total RNA-seq
17
single cell RNA-seq
1
small RNA-seq
Assay category
98
DNA accessibility
75
Transcription
36
DNA binding
3
DNA methylation
1
3D chromatin structure
Date released
57
August, 2021
6
July, 2019
5
February, 2021
3
May, 2023
3
October, 2019
1
December, 2019
Available data
62
txt
14
tsv
9
bam
9
bigWig
5
csv
Organism
75
Homo sapiens
Biosample type
68
tissue
6
primary cell
1
cell line
Organ
479
connective tissue
401
adipose tissue
381
pancreas
193
liver
166
heart
113
epithelium
75
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
23
brain
19
eye
12
embryo
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
75
AMP
47
KPMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
60
Katalin Susztak, Upenn
15
AMP-T2D consortium
Audit category:
5
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inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
files.file_type!
xls
BIOSAMPLE
ASSAY
75 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
kidney
49
17
metanephros
1
1
primary cell
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
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cell line
glomerular visceral epithelial cell
1
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