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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
single cell RNA-seq
54
total RNA-seq
1
small RNA-seq
Assay category
159
DNA accessibility
119
Transcription
25
DNA binding
3
DNA methylation
1
3D chromatin structure
Date released
57
August, 2021
47
September, 2023
6
July, 2019
5
February, 2021
3
May, 2023
October, 2019
1
December, 2019
Available data
62
txt
11
tsv
6
bam
6
bigWig
5
csv
Organism
119
Homo sapiens
Biosample type
115
tissue
4
primary cell
Organ
479
connective tissue
441
pancreas
401
adipose tissue
192
liver
164
heart
163
epithelium
119
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
22
brain
12
embryo
9
lung
9
musculature of body
5
eye
4
skeleton
3
limb
1
nerve
1
pericardium
1
spinal cord
0
urinary bladder
Project
72
AMP
47
KPMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
60
Katalin Susztak, Upenn
47
KPMP
12
AMP-T2D consortium
Audit category:
5
audit script error
audit.ERROR.category!
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
119 results
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single cell RNA-seq
total RNA-seq
small RNA-seq
tissue
kidney
64
49
metanephros
1
1
primary cell
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney epithelial cell
1
renal cortical epithelial cell
1
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