Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
single cell RNA-seq
59
total RNA-seq
2
small RNA-seq
Assay category
195
DNA binding
183
DNA accessibility
163
Transcription
11
DNA methylation
5
3D chromatin structure
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
27
September, 2018
18
July, 2019
5
December, 2019
4
May, 2021
4
November, 2020
3
August, 2018
3
June, 2018
2
May, 2020
2
October, 2018
2
October, 2019
1
February, 2021
1
November, 2018
Available data
158
bigWig
156
bam
156
tsv
122
fastq
2
bed bed3+
2
csv
Organism
163
Homo sapiens
Biosample type
1152
tissue
163
primary cell
136
in vitro differentiated cells
109
cell line
Organ
110
epithelium
102
pancreas
15
connective tissue
6
kidney
5
liver
4
heart
3
brain
2
adipose tissue
2
artery
2
blood vessel
2
musculature of body
2
vasculature
1
pericardium
Project
177
HPAP
163
AMP
96
T1D
Genome assembly (visualization)
158
hg19
156
GRCh38
Lab
161
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Audit category:
7
inconsistent ontology term
month_released!
March, 2020
organ_slims!
nerve
BIOSAMPLE
ASSAY
163 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
small RNA-seq
primary cell
pancreatic alpha cell
12
10
pancreatic beta cell
12
10
pancreatic acinar cell
12
4
pancreatic ductal cell
10
4
pancreatic delta cell
11
+ See 35 more…
See all biosamples
Download