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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1271total RNA-seq
  • 217single cell RNA-seq
  • 18small RNA-seq
Assay category
  • 1765DNA binding
  • 1506Transcription
  • 608DNA accessibility
  • 50DNA methylation
  • 263D chromatin structure
Target of assay
  • 3control
Date released
  • 551February, 2021
  • 168July, 2018
  • 145May, 2020
  • 131May, 2021
  • 113August, 2021
  • 89August, 2017
  • 65July, 2019
  • 49April, 2018
  • 30October, 2019
  • 27May, 2022
  • 27September, 2018
  • 25February, 2020
  • 20November, 2019
  • 15February, 2018
  • 13February, 2023
  • 11March, 2020
  • 8December, 2019
  • 5January, 2019
  • 4November, 2020
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
  • 1May, 2023
  • 1November, 2018
Available data
  • 1436tsv
  • 1308bam
  • 1304bigWig
  • 245fastq
  • 15txt
  • 8csv
  • 2bed bed3+
Organism
  • 1506Homo sapiens
Biosample type
  • 1103tissue
  • 163primary cell
  • 138in vitro differentiated cells
  • 102cell line
Organ
  • 481connective tissue
  • 416pancreas
  • 401adipose tissue
  • 184liver
  • 166heart
  • 146epithelium
  • 67blood vessel
  • 67vasculature
  • 62bone element
  • 58artery
  • 24brain
  • 19eye
  • 18kidney
  • 14embryo
  • 9musculature of body
  • 7limb
  • 5nerve
  • 4skeleton
  • 1pericardium
  • 1spinal cord
Project
  • 1506AMP
Genome assembly (visualization)
  • 1305hg19
  • 1303GRCh38
Lab
  • 1472AMP-T2D consortium
  • 20Karen Mohlke, UNC
  • 14Kyle Gaulton, UCSD
Audit category:
  • 133inconsistent ontology term
  • 7audit script error
BIOSAMPLE
ASSAY

1506 results

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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue382
islet of Langerhans2846
liver16711
bone tissue58
heart left ventricle318
primary cell
pancreatic alpha cell1012
pancreatic beta cell1012
pancreatic acinar cell412
pancreatic ductal cell410
pancreatic delta cell11
in vitro differentiated cells
cardiomyocytes59
cardiac precursors (cardiac muscle cell)19
induced pluripotent stem cell9
embryonic stem cell7
neural progenitor cell7
cell line
smooth muscle cell of the coronary artery52
EndoC_BH131
H1-hESC8
HepG25
early embryonic cell2
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