Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
total RNA-seq
70
single cell RNA-seq
Assay category
197
Transcription
111
DNA accessibility
84
DNA binding
53
DNA methylation
8
3D chromatin structure
Date released
37
February, 2023
33
April, 2018
33
July, 2018
26
February, 2021
26
September, 2018
16
September, 2020
5
December, 2019
5
July, 2019
4
May, 2021
3
August, 2018
3
October, 2019
2
March, 2020
2
October, 2018
1
June, 2018
1
November, 2019
Available data
147
fastq
144
bam
144
bigWig
144
tsv
Organism
197
Homo sapiens
Biosample type
163
primary cell
34
cell line
2
in vitro differentiated cells
2
tissue
Organ
197
epithelium
188
pancreas
56
heart
54
artery
54
blood vessel
54
vasculature
19
liver
15
connective tissue
10
kidney
8
embryo
2
adipose tissue
2
musculature of body
1
pericardium
Project
142
AMP
53
HPAP
2
T1D
Genome assembly (visualization)
144
GRCh38
144
hg19
Lab
144
AMP-T2D consortium
53
Klaus Kaestner, Upenn
Audit category:
34
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
197 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 11 more…
cell line
EndoC_BH1
33
glomerular visceral epithelial cell
1
See all biosamples
Download