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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
478
DNA binding
63
Transcription
22
DNA accessibility
4
3D chromatin structure
1
DNA methylation
1
DNA sequencing
Date released
26
February, 2021
17
August, 2021
5
January, 2019
4
March, 2020
4
May, 2021
4
October, 2019
2
March, 2023
1
November, 2019
Available data
61
tsv
52
bam
52
bigWig
5
fastq
Organism
61
Homo sapiens
Biosample type
1118
tissue
432
primary cell
137
in vitro differentiated cells
63
cell line
2
stem cell
Organ
52
artery
52
blood vessel
heart
52
vasculature
34
epithelium
33
pancreas
14
liver
8
embryo
4
kidney
Project
59
AMP
2
T1D
2
community
Genome assembly (visualization)
52
GRCh38
52
hg19
Lab
52
AMP-T2D consortium
9
Bing Ren, UCSD
2
Anna Gloyn, Oxford
Audit category:
36
inconsistent ontology term
files.file_type!
bed bed3
organ_slims!
heart
BIOSAMPLE
ASSAY
63 results
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total RNA-seq
shRNA RNA-seq
siRNA RNA-seq
cell line
EndoC_BH1
33
HepG2
14
H1-hESC
8
EndoC-BH1
1
1
early embryonic cell
2
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