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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 136total RNA-seq
  • 2single cell RNA-seq
Assay category
  • 198DNA binding
  • 138Transcription
  • 43DNA accessibility
  • 43D chromatin structure
Date released
  • 84May, 2021
  • 22February, 2021
  • 15February, 2018
  • 7August, 2021
  • 4February, 2023
  • 2December, 2019
  • 2March, 2020
  • 2October, 2019
Available data
  • 129tsv
  • 127bam
  • 127bigWig
  • 15fastq
Organism
  • 138Homo sapiens
Biosample type
  • 1227tissue
  • 436primary cell
  • 138in vitro differentiated cells
  • 115cell line
  • 2stem cell
Organ
  • 9connective tissue
  • 6embryo
  • 2epithelium
  • 1heart
Project
  • 138AMP
Genome assembly (visualization)
  • 127GRCh38
  • 127hg19
Lab
  • 133AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
Audit category:
  • 91inconsistent ontology term
  • 2audit script error
BIOSAMPLE
ASSAY

138 results

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Clear Filters
total RNA-seq
single cell RNA-seq
in vitro differentiated cells
cardiomyocytes59
cardiac precursors (cardiac muscle cell)19
induced pluripotent stem cell9
embryonic stem cell7
neural progenitor cell7
adipocyte5
cardiomyocytes (cardiac muscle cell)32
pancreatic endoderm4
definitive endodermal cell2
endocrine cell2
immature adipocyte2
posterior foregut2
primitive gut cell2
cardiac fibroblast1
endothelial cell1
hematopoietic multipotent progenitor cell1
intermediate cardiomyocytes1
intermediate endothelial cell1
intermediate smooth muscle cell1
islet precursor cell1
lymphocyte of B lineage (iPSC)1
mesodermal cell (lineage marker-negative)1
mesodermal cell (pacemaker intermediate)1
preadipocyte1
smooth muscle cell1
stem cell1
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