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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
184
single cell RNA-seq
169
total RNA-seq
2
small RNA-seq
Assay category
355
Transcription
279
DNA binding
276
DNA accessibility
58
DNA methylation
10
3D chromatin structure
Target of assay
3
control
Date released
February, 2023
56
September, 2020
55
May, 2021
48
July, 2018
47
May, 2020
43
April, 2018
33
May, 2022
27
September, 2018
16
July, 2019
13
February, 2021
5
December, 2019
4
November, 2020
3
August, 2018
June, 2018
2
October, 2018
2
October, 2019
1
November, 2018
Available data
249
bigWig
247
bam
247
tsv
169
fastq
52
zippedFastqFolder
2
bed bed3+
2
csv
Organism
355
Homo sapiens
Biosample type
1209
tissue
355
primary cell
134
in vitro differentiated cells
63
cell line
2
stem cell
Organ
125
epithelium
117
pancreas
15
connective tissue
6
kidney
5
liver
4
heart
3
brain
2
adipose tissue
artery
2
blood vessel
2
musculature of body
2
vasculature
1
pericardium
Project
158
AMP
101
HPAP
96
T1D
Genome assembly (visualization)
249
hg19
247
GRCh38
Lab
156
AMP-T2D consortium
101
Klaus Kaestner, Upenn
98
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
month_released!
February, 2023
June, 2018
organ_slims!
artery
BIOSAMPLE
ASSAY
355 results
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single cell RNA-seq
total RNA-seq
small RNA-seq
primary cell
Langerhans cell
85
monocyte
54
pancreatic alpha cell
12
25
pancreatic beta cell
12
11
pancreatic acinar cell
12
4
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