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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 247total RNA-seq
  • 187single cell RNA-seq
  • 2small RNA-seq
Assay category
  • 436Transcription
  • 288DNA accessibility
  • 279DNA binding
  • 58DNA methylation
  • 103D chromatin structure
Target of assay
  • 3control
Date released
  • 76February, 2023
  • 56September, 2020
  • 55May, 2021
  • 48July, 2018
  • 47May, 2020
  • 43April, 2018
  • 33May, 2022
  • 27September, 2018
  • 18July, 2019
  • 13February, 2021
  • 5December, 2019
  • 4November, 2020
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
  • 2October, 2019
  • 1November, 2018
Available data
  • 254bigWig
  • 252bam
  • 252tsv
  • 248fastq
  • 52zippedFastqFolder
  • 2bed bed3+
  • 2csv
Organism
  • 436Homo sapiens
Biosample type
  • 1227tissue
  • 436primary cell
  • 138in vitro differentiated cells
  • 115cell line
  • 2stem cell
Organ
  • 163epithelium
  • 155pancreas
  • 15connective tissue
  • 6kidney
  • 5liver
  • 4heart
  • 3brain
  • 2adipose tissue
  • 2artery
  • 2blood vessel
  • 2musculature of body
  • 2vasculature
  • 1pericardium
Project
  • 177HPAP
  • 163AMP
  • 96T1D
Genome assembly (visualization)
  • 254hg19
  • 252GRCh38
Lab
  • 177Klaus Kaestner, Upenn
  • 161AMP-T2D consortium
  • 98Kyle Gaulton, UCSD
Audit category:
  • 11inconsistent ontology term
BIOSAMPLE
ASSAY

436 results

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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
primary cell
Langerhans cell85
pancreatic alpha cell5212
monocyte54
exocrine cell39
pancreatic beta cell2112
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