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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
total RNA-seq
68
single cell RNA-seq
Assay category
269
DNA binding
176
DNA accessibility
154
Transcription
22
DNA methylation
14
3D chromatin structure
Date released
August, 2021
47
September, 2023
27
May, 2022
25
February, 2020
14
February, 2023
14
October, 2019
9
April, 2020
6
February, 2021
4
July, 2018
4
May, 2023
2
March, 2020
1
December, 2019
1
May, 2021
Available data
808
tsv
780
bam
bigWig
103
fastq
15
txt
6
csv
Organism
154
Homo sapiens
Biosample type
180
primary cell
154
tissue
11
in vitro differentiated cells
2
cell line
2
stem cell
Organ
56
kidney
22
liver
19
eye
19
pancreas
12
brain
9
lung
4
bone element
4
heart
4
skeleton
3
adipose tissue
3
blood vessel
3
connective tissue
3
limb
3
musculature of body
3
vasculature
2
artery
2
epithelium
1
nerve
1
spinal cord
Project
91
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
63
AMP-T2D consortium
47
KPMP
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
3
Katalin Susztak, Upenn
Audit category:
5
audit script error
1
inconsistent ontology term
files.file_type!
bigWig
month_released!
August, 2021
May, 2020
BIOSAMPLE
ASSAY
154 results
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total RNA-seq
single cell RNA-seq
tissue
kidney
56
islet of Langerhans
31
liver
20
1
lung
9
retina
3
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