Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
829
total RNA-seq
167
single cell RNA-seq
16
small RNA-seq
Assay category
1012
Transcription
857
DNA binding
469
DNA accessibility
38
DNA methylation
16
3D chromatin structure
Date released
445
February, 2021
May, 2020
120
July, 2018
99
August, 2021
89
August, 2017
47
July, 2019
47
September, 2023
39
May, 2021
25
February, 2020
22
October, 2019
21
May, 2022
19
November, 2019
10
February, 2023
9
April, 2020
9
March, 2020
6
April, 2018
4
May, 2023
1
December, 2019
Available data
907
tsv
780
bam
774
bigWig
103
fastq
txt
6
csv
Organism
1012
Homo sapiens
Biosample type
1012
tissue
386
primary cell
138
in vitro differentiated cells
115
cell line
2
stem cell
Organ
457
connective tissue
399
adipose tissue
285
pancreas
109
heart
58
bone element
53
kidney
31
liver
21
brain
19
eye
13
blood vessel
13
vasculature
9
lung
7
limb
7
musculature of body
5
nerve
4
artery
2
epithelium
1
spinal cord
Project
949
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
775
GRCh38
775
hg19
Lab
926
AMP-T2D consortium
47
KPMP
20
Karen Mohlke, UNC
9
Xin Sun, UCSD
6
Kyle Gaulton, UCSD
3
Katalin Susztak, Upenn
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
txt
month_released!
June, 2018
May, 2020
BIOSAMPLE
ASSAY
1012 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
islet of Langerhans
286
6
bone tissue
58
kidney
51
liver
24
1
1
+ See 52 more…
See all biosamples
Download