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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1031total RNA-seq
  • 180single cell RNA-seq
  • 16small RNA-seq
Assay category
  • 1227Transcription
  • 907DNA binding
  • 470DNA accessibility
  • 38DNA methylation
  • 163D chromatin structure
Date released
  • 450February, 2021
  • 156August, 2021
  • 143May, 2020
  • 120July, 2018
  • 89August, 2017
  • 47July, 2019
  • 47September, 2023
  • 39May, 2021
  • 27May, 2022
  • 25February, 2020
  • 22October, 2019
  • 19November, 2019
  • 14February, 2023
  • 9April, 2020
  • 9March, 2020
  • 6April, 2018
  • 4May, 2023
  • 1December, 2019
Available data
  • 1050tsv
  • 923bam
  • 917bigWig
  • 103fastq
  • 72txt
  • 6csv
Organism
  • 1227Homo sapiens
Biosample type
  • 1227tissue
  • 436primary cell
  • 138in vitro differentiated cells
  • 115cell line
  • 2stem cell
Organ
  • 457connective tissue
  • 399adipose tissue
  • 291pancreas
  • 174liver
  • 115kidney
  • 109heart
  • 62bone element
  • 21brain
  • 19eye
  • 13blood vessel
  • 13vasculature
  • 9lung
  • 7limb
  • 7musculature of body
  • 5nerve
  • 4artery
  • 4skeleton
  • 2epithelium
  • 1spinal cord
Project
  • 1164AMP
  • 47KPMP
  • 9LungMap
  • 7T1D
Genome assembly (visualization)
  • 918GRCh38
  • 918hg19
Lab
  • 1078AMP-T2D consortium
  • 60Katalin Susztak, Upenn
  • 47KPMP
  • 20Karen Mohlke, UNC
  • 12Kyle Gaulton, UCSD
  • 9Xin Sun, UCSD
  • 1Bing Ren, UCSD
Audit category:
  • 5audit script error
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

1227 results

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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue382
islet of Langerhans2926
liver16711
kidney4964
bone tissue58
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