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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
total RNA-seq
Assay category
101
DNA accessibility
70
Transcription
56
DNA binding
53
DNA methylation
9
3D chromatin structure
Date released
42
February, 2023
16
September, 2020
4
July, 2018
3
February, 2020
2
March, 2020
1
August, 2021
1
May, 2021
1
May, 2023
Available data
bam
808
tsv
804
bigWig
253
fastq
6
txt
Organism
70
Homo sapiens
Biosample type
53
primary cell
17
tissue
Organ
113
kidney
96
heart
67
pancreas
55
epithelium
31
liver
19
eye
12
brain
9
blood vessel
9
lung
9
vasculature
7
connective tissue
4
artery
4
bone element
skeleton
3
adipose tissue
3
limb
3
musculature of body
1
nerve
1
spinal cord
Project
53
HPAP
10
AMP
7
T1D
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
53
Klaus Kaestner, Upenn
10
AMP-T2D consortium
6
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
files.file_type!
bam
organ_slims!
skeleton
BIOSAMPLE
ASSAY
70 results
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total RNA-seq
primary cell
pancreatic alpha cell
42
pancreatic beta cell
11
tissue
islet of Langerhans
12
adipose tissue
1
body of pancreas
1
omental fat pad
1
pancreas
1
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