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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
230
total RNA-seq
7
single cell RNA-seq
3
small RNA-seq
Assay category
654
DNA binding
240
Transcription
67
DNA accessibility
10
DNA methylation
8
3D chromatin structure
1
DNA sequencing
Date released
143
May, 2020
53
February, 2021
15
August, 2021
12
July, 2019
5
December, 2019
5
January, 2019
4
February, 2020
2
March, 2020
1
October, 2019
Available data
239
tsv
220
bam
220
bigWig
5
fastq
1
csv
Organism
240
Homo sapiens
Biosample type
167
tissue
66
cell line
7
primary cell
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
173
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
240
AMP
Genome assembly (visualization)
220
GRCh38
220
hg19
Lab
231
AMP-T2D consortium
Karen Mohlke, UNC
9
Bing Ren, UCSD
lab.title!
Karen Mohlke, UNC
organ_slims!
intestine
BIOSAMPLE
ASSAY
240 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
liver
147
1
1
aorta
1
4
right lobe of liver
3
2
ascending aorta
2
pulmonary artery
2
+ See 3 more…
cell line
smooth muscle cell of the coronary artery
52
HepG2
14
primary cell
hepatocyte
5
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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