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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
545
total RNA-seq
21
single cell RNA-seq
Assay category
566
Transcription
49
DNA accessibility
8
DNA binding
6
DNA methylation
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
553
tsv
548
bam
548
bigWig
15
fastq
6
csv
5
txt
Organism
566
Homo sapiens
Biosample type
450
tissue
78
cell line
22
in vitro differentiated cells
16
primary cell
Organ
449
connective tissue
386
adipose tissue
58
bone element
52
artery
52
blood vessel
52
heart
52
vasculature
29
epithelium
29
pancreas
5
kidney
1
liver
Project
554
AMP
12
HPAP
Genome assembly (visualization)
548
GRCh38
548
hg19
Lab
554
AMP-T2D consortium
12
Klaus Kaestner, Upenn
Audit category:
44
inconsistent ontology term
5
audit script error
month_released!
October, 2022
BIOSAMPLE
ASSAY
566 results
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total RNA-seq
single cell RNA-seq
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
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cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
primary cell
Langerhans cell
12
pancreatic alpha cell
2
osteoblast
1
pancreatic acinar cell
1
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