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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
total RNA-seq
3
single cell RNA-seq
Assay category
316
DNA binding
35
Transcription
33
DNA accessibility
5
3D chromatin structure
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
21
bam
21
bigWig
21
tsv
5
fastq
Organism
35
Homo sapiens
Biosample type
22
tissue
7
primary cell
4
cell line
2
in vitro differentiated cells
Organ
14
eye
8
epithelium
6
kidney
5
pancreas
4
limb
4
nerve
2
heart
1
brain
1
liver
Project
35
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
35
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
August, 2022
BIOSAMPLE
ASSAY
35 results
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total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
14
tibial nerve
4
heart
2
brain
1
liver
1
primary cell
pancreatic acinar cell
2
1
pancreatic alpha cell
2
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
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