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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
275
total RNA-seq
1
single cell RNA-seq
Assay category
276
Transcription
165
DNA binding
139
DNA accessibility
1
DNA methylation
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
177
tsv
175
bigWig
173
bam
76
fastq
4
txt
2
bed bed3+
Organism
276
Homo sapiens
Biosample type
131
primary cell
88
in vitro differentiated cells
53
tissue
4
cell line
Organ
83
pancreas
45
epithelium
5
connective tissue
4
bone element
4
eye
4
heart
4
skeleton
2
embryo
Project
144
AMP
76
HPAP
56
T1D
Genome assembly (visualization)
175
hg19
173
GRCh38
Lab
136
AMP-T2D consortium
76
Klaus Kaestner, Upenn
64
Kyle Gaulton, UCSD
Audit category:
71
inconsistent ontology term
month_released!
October, 2017
BIOSAMPLE
ASSAY
276 results
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Clear Filters
total RNA-seq
single cell RNA-seq
primary cell
monocyte
52
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
CD8-positive, alpha-beta T cell
2
+ See 1 more…
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
embryonic stem cell
5
immature adipocyte
2
adipocyte
1
+ See 12 more…
tissue
islet of Langerhans
41
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
cardiac atrium
1
+ See 6 more…
cell line
EndoC_BH1
4
See all biosamples
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