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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 182total RNA-seq
Assay category
  • 182Transcription
  • 165DNA binding
  • 34DNA accessibility
  • 1DNA methylation
Date released
  • 563February, 2021
  • 190May, 2020
  • 182May, 2021
  • 180August, 2021
  • 168July, 2018
  • 94February, 2023
  • 89August, 2017
  • 65July, 2019
  • 60May, 2022
  • 56September, 2020
  • 49April, 2018
  • 47September, 2023
  • 30October, 2019
  • 27September, 2018
  • 25February, 2020
  • 20November, 2019
  • 15February, 2018
  • 15March, 2020
  • 9April, 2020
  • 8December, 2019
  • 5January, 2019
  • 4March, 2023
  • 4May, 2023
  • 4November, 2020
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
  • 1November, 2018
Available data
  • 175bigWig
  • 173bam
  • 173tsv
  • 2bed bed3+
Organism
  • 182Homo sapiens
Biosample type
  • 84in vitro differentiated cells
  • 55primary cell
  • 39tissue
  • 4cell line
Organ
  • 41pancreas
  • 6epithelium
  • 3heart
  • 2embryo
  • 1connective tissue
Project
  • 131AMP
  • 51T1D
Genome assembly (visualization)
  • 175hg19
  • 173GRCh38
Lab
  • 123AMP-T2D consortium
  • 59Kyle Gaulton, UCSD
Audit category:
  • 69inconsistent ontology term
BIOSAMPLE
ASSAY

182 results

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Clear Filters
total RNA-seq
in vitro differentiated cells
cardiomyocytes59
induced pluripotent stem cell9
embryonic stem cell5
cardiac fibroblast1
cardiomyocytes (cardiac muscle cell)1
endothelial cell1
hematopoietic multipotent progenitor cell1
intermediate cardiomyocytes1
intermediate endothelial cell1
intermediate smooth muscle cell1
mesodermal cell (lineage marker-negative)1
mesodermal cell (pacemaker intermediate)1
smooth muscle cell1
stem cell1
primary cell
monocyte52
CD8-positive, alpha-beta T cell2
embryonic stem cell1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
cell line
EndoC_BH14
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