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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
796
total RNA-seq
80
single cell RNA-seq
5
small RNA-seq
Assay category
881
Transcription
291
DNA binding
181
DNA accessibility
60
DNA methylation
9
3D chromatin structure
Date released
412
February, 2021
157
July, 2018
89
August, 2017
42
February, 2023
41
May, 2021
39
April, 2018
26
September, 2018
20
November, 2019
17
July, 2019
16
September, 2020
6
May, 2022
5
March, 2020
3
August, 2018
3
February, 2020
2
October, 2018
1
August, 2021
1
June, 2018
1
May, 2023
Available data
811
bam
809
tsv
805
bigWig
253
fastq
6
txt
Organism
881
Homo sapiens
Biosample type
690
tissue
158
primary cell
33
cell line
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
819
AMP
53
HPAP
9
T1D
Genome assembly (visualization)
806
GRCh38
806
hg19
Lab
815
AMP-T2D consortium
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
38
inconsistent ontology term
BIOSAMPLE
ASSAY
881 results
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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
islet of Langerhans
278
6
subcutaneous adipose tissue
7
1
omental fat pad
5
1
body of pancreas
3
2
+ See 2 more…
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 6 more…
cell line
EndoC_BH1
33
See all biosamples
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