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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 190total RNA-seq
  • 89single cell RNA-seq
  • 11small RNA-seq
Assay category
  • 290Transcription
  • 181DNA binding
  • 140DNA accessibility
  • 93D chromatin structure
  • 1DNA methylation
Date released
  • 64May, 2021
  • 44July, 2018
  • 43May, 2020
  • 39April, 2018
  • 34July, 2019
  • 25February, 2020
  • 13February, 2023
  • 8August, 2021
  • 7February, 2021
  • 3August, 2018
  • 3March, 2020
  • 3October, 2019
  • 1February, 2018
  • 1June, 2018
  • 1May, 2022
  • 1September, 2018
Available data
  • 264tsv
  • 238bam
  • 238bigWig
  • 86fastq
  • 4txt
  • 2csv
Organism
  • 290Homo sapiens
Biosample type
  • 165primary cell
  • 77tissue
  • 48in vitro differentiated cells
Organ
  • 82pancreas
  • 69epithelium
  • 22connective tissue
  • 20brain
  • 14heart
  • 9adipose tissue
  • 8kidney
  • 7musculature of body
  • 5blood vessel
  • 5vasculature
  • 4artery
  • 4bone element
  • 4liver
  • 4skeleton
  • 3limb
  • 2embryo
  • 1eye
  • 1nerve
  • 1pericardium
  • 1spinal cord
Project
  • 219AMP
  • 71T1D
Genome assembly (visualization)
  • 238GRCh38
  • 238hg19
Lab
  • 215AMP-T2D consortium
  • 74Kyle Gaulton, UCSD
  • 1Bing Ren, UCSD
Audit category:
  • 28inconsistent ontology term
BIOSAMPLE
ASSAY

290 results

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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
primary cell
monocyte26
pancreatic alpha cell11
pancreatic beta cell11
pancreatic delta cell10
pancreatic ductal cell9
tissue
islet of Langerhans106
heart211
frontal cortex21
liver21
skeletal muscle tissue111
in vitro differentiated cells
cardiomyocytes12
induced pluripotent stem cell9
neural progenitor cell7
embryonic stem cell5
adipocyte1
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