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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 336ATAC-seq
Assay category
  • 336DNA accessibility
Date released
  • 77May, 2022
  • 68February, 2023
  • 64August, 2021
  • 30May, 2021
  • 17October, 2019
  • 16February, 2021
  • 14September, 2018
  • 11May, 2023
  • 7August, 2020
  • 7October, 2017
  • 6July, 2019
  • 5August, 2017
  • 5September, 2017
  • 3January, 2018
  • 3September, 2020
  • 2November, 2019
  • 1November, 2020
Available data
  • 235bed narrowPeak
  • 91bam
  • 73bigWig
  • 64xls
  • 59fastq
  • 39zippedFastqFolder
  • 24bigBed narrowPeak
  • 5bed bed3
  • 1bed bed3+
Organism
  • 336Homo sapiens
Biosample type
  • 215tissue
  • 87primary cell
  • 26cell line
  • 8in vitro differentiated cells
Organ
  • 113pancreas
  • 101epithelium
  • 75kidney
  • 47heart
  • 46blood vessel
  • 46vasculature
  • 45artery
  • 28eye
  • 22liver
  • 10connective tissue
  • 8bone element
  • 8limb
  • 8skeleton
  • 3adipose tissue
  • 3brain
  • 1blood
  • 1bodily fluid
  • 1musculature of body
  • 1nerve
  • 1pituitary gland
  • 1skin of body
  • 1spleen
Project
  • 287AMP
  • 49HPAP
Genome assembly (visualization)
  • 193GRCh38
  • 146hg19
Lab
  • 173AMP-T2D consortium
  • 75Katalin Susztak, Upenn
  • 49Klaus Kaestner, Upenn
  • 20Karen Mohlke, UNC
  • 19Kyle Gaulton, UCSD
Audit category:
  • 21inconsistent ontology term
BIOSAMPLE
ASSAY

336 results

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Clear Filters
ATAC-seq
tissue
kidney75
coronary artery36
islet of Langerhans31
liver20
retina15
primary cell
pancreatic alpha cell35
pancreatic beta cell23
monocyte13
pancreatic acinar cell9
pancreatic ductal cell4
cell line
EndoC_BH117
smooth muscle cell of the coronary artery8
GM128781
in vitro differentiated cells
chondrocyte5
Pancreatic progenitors (progenitor cell of endocrine pancreas)1
embryonic stem cell1
immature adipocyte1
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