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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 26Hi-C
Assay category
  • 263D chromatin structure
Date released
  • 10March, 2020
  • July, 2019
  • 5October, 2019
  • 3August, 2021
  • 3October, 2022
  • 2November, 2019
  • 1December, 2018
  • 1March, 2019
  • 1March, 2023
Available data
  • 23hic
  • 20bedpe bed3+
  • 3cool
  • 1bed bed3+
  • 1bedpe
  • 1bigWig
  • 1fastq
  • 1hdf5
Organism
  • 26Homo sapiens
Biosample type
  • 12tissue
  • 6primary cell
  • 4cell line
  • 4in vitro differentiated cells
Organ
  • 9pancreas
  • 6epithelium
  • 3blood vessel
  • 3heart
  • 3liver
  • 3vasculature
  • 2musculature of body
  • 2vein
  • 1kidney
Project
  • 22AMP
  • 3HPAP
  • 1ITG
Genome assembly (visualization)
  • 23hg19
  • 2GRCh38
Lab
  • 18AMP-T2D consortium
  • 3Bing Ren, UCSD
  • 3Klaus Kaestner, Upenn
  • 1ITG
  • 1Katalin Susztak, Upenn
Audit category:
  • 5inconsistent ontology term
  • 4audit script error
Audit category:
  • 1inconsistent assembly
month_released!
  • July, 2019
BIOSAMPLE
ASSAY

26 results

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Clear Filters
Hi-C
tissue
islet of Langerhans3
psoas muscle2
aorta1
heart1
heart left ventricle1
primary cell
endothelial cell of umbilical vein2
chondrocytes1
pancreatic acinar cell1
pancreatic alpha cell1
pancreatic beta cell1
cell line
HepG22
EndoC_BH11
Panc11
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
cardiac precursors (cardiac muscle cell)1
lymphocyte of B lineage (iPSC)1
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