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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
Hi-C
Assay category
24
3D chromatin structure
Date released
March, 2020
8
July, 2019
5
October, 2019
3
August, 2021
3
October, 2022
2
November, 2019
1
December, 2018
1
March, 2019
1
March, 2023
Available data
13
hic
10
bedpe bed3+
5
bed bed3+
5
bigWig
5
hdf5
3
cool
1
bedpe
1
fastq
Organism
24
Homo sapiens
Biosample type
9
primary cell
9
tissue
4
cell line
2
in vitro differentiated cells
Organ
8
pancreas
7
epithelium
4
limb
4
musculature of body
3
blood vessel
3
brain
3
liver
3
vasculature
1
connective tissue
1
heart
1
kidney
1
vein
Project
20
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
17
hg19
2
GRCh38
Lab
16
AMP-T2D consortium
3
Bing Ren, UCSD
3
Klaus Kaestner, Upenn
1
ITG
1
Katalin Susztak, Upenn
Audit category:
4
audit script error
3
inconsistent ontology term
Audit category:
1
inconsistent assembly
month_released!
March, 2020
BIOSAMPLE
ASSAY
24 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
chondrocytes
1
endothelial cell of hepatic sinusoid
1
+ See 4 more…
tissue
gastrocnemius medialis
4
islet of Langerhans
3
heart
1
kidney
1
cell line
HepG2
2
EndoC_BH1
1
Panc1
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
See all biosamples
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