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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19Hi-C
Assay category
  • 193D chromatin structure
Date released
  • 4July, 2019
  • 4March, 2020
  • 4October, 2019
  • 3October, 2022
  • 1August, 2021
  • 1December, 2018
  • 1March, 2019
  • 1March, 2023
Available data
  • 12hic
  • 11bedpe bed3+
  • 5bed bed3+
  • 5bigWig
  • 5hdf5
  • 3cool
  • 1bedpe
  • 1fastq
Organism
  • 19Homo sapiens
Biosample type
  • 9primary cell
  • 4in vitro differentiated cells
  • 4tissue
  • 2cell line
Organ
  • 7pancreas
  • 6epithelium
  • 3blood vessel
  • 3brain
  • 3vasculature
  • 2liver
  • 1connective tissue
  • 1heart
  • 1vein
Project
  • 15AMP
  • 3HPAP
  • 1ITG
Genome assembly (visualization)
  • 16hg19
  • 2GRCh38
Lab
  • 13AMP-T2D consortium
  • 3Klaus Kaestner, Upenn
  • 2Bing Ren, UCSD
  • 1ITG
Audit category:
  • 4inconsistent ontology term
  • 3audit script error
Audit category:
  • 1inconsistent assembly
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

19 results

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Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum1
brain microvascular endothelial cell1
brain pericyte1
chondrocytes1
endothelial cell of hepatic sinusoid1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
cardiac precursors (cardiac muscle cell)1
lymphocyte of B lineage (iPSC)1
tissue
islet of Langerhans2
heart1
pancreas1
cell line
HepG21
Panc11
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