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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
245
total RNA-seq
Assay category
245
Transcription
Date released
93
February, 2023
59
August, 2021
25
February, 2020
20
May, 2022
16
September, 2020
14
October, 2019
9
May, 2021
4
July, 2018
2
March, 2020
2
May, 2020
1
May, 2023
Available data
1315
tsv
bam
1278
bigWig
237
fastq
59
txt
2
bed bed3+
Organism
245
Homo sapiens
Biosample type
130
tissue
97
primary cell
9
cell line
9
in vitro differentiated cells
Organ
67
pancreas
55
epithelium
49
kidney
30
liver
19
eye
12
brain
7
connective tissue
4
bone element
4
skeleton
3
adipose tissue
3
blood vessel
3
heart
3
limb
3
vasculature
2
artery
2
musculature of body
1
nerve
1
spinal cord
Project
146
AMP
92
HPAP
7
T1D
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
92
Klaus Kaestner, Upenn
61
AMP-T2D consortium
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
13
Kyle Gaulton, UCSD
10
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
245 results
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Clear Filters
total RNA-seq
tissue
kidney
49
islet of Langerhans
26
liver
20
retina
3
pigmented layer of retina
2
+ See 30 more…
primary cell
pancreatic alpha cell
42
exocrine cell
39
pancreatic beta cell
11
CD8-positive, alpha-beta T cell
2
monocyte
1
+ See 2 more…
cell line
HepG2
9
in vitro differentiated cells
embryonic stem cell
5
immature adipocyte
2
adipocyte
1
preadipocyte
1
See all biosamples
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